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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929334.1_cds_XP_016476657.1_68464
CDS Infomation

[gene=LOC107798201] [db_xref=GeneID:107798201] [protein=probable sodium/metabolite cotransporter BASS1, chloroplastic] [protein_id=XP_016476657.1] [location=join(43966..44352,45058..45198,46731..46886,47004..47125,47234..47395,47476..47536,48076..48264)] [gbkey=CDS]
Sequence

ATGGCGTTTTCTCTTTGCTTTACTCCACTCACTTTATACCCAAAACAGATACCCCTTAAG
AAACTTATCATTTCAACAAGGCCAAAAATGTCAAGGCAGAGGCTGTTGACTGTCAATTGT
GTTCAAGAAAATTCTCATAATCTTCCTGCGGCAGTGGTTCATGTAAAATCTAGATGGGAA
GAATGGCTGTCAACTGCAGCTAGCCTTTACCCTGTTTATGTAACTGTTGGTGGAATTGTT
GCCTGCTTGAGACCATCTACGTTTTCATGGTTTGTAAATGCAGGTCCTACTTCTTATAGT
TTAGCTCTTGGGTTTATAATGCTGTCTATGGGTCTCACTTTGGAGCTCAAAGACTTATTC
AACTTGTTCTTGCAAAGGCCTCTTTCTATTCTTTTTGGTTGTGCTGCTCAATATACAATT
ATGCCAGCCTTCGGAGTGCTAGTTAGCAAATCTATGGGCCTCCCTCCTTCAATTTCCGTT
GGTCTAATATTGCTTGCTTGTTGCCCTGGGGGTACTGCGTCCAACGTGGTAACCTTAATT
GCACAAGGAGATGTACCATTGTCAGTAGTGATGACATTATGTACCACGCTTGGAGCAGTT
GTTCTCACCCCCCTCTTGACAATGATTCTGGCCGGCACATATGTTCCTGTGGACGCTATT
AAGCTTTCCATCAGTACACTACAGGTGGTGGTTGCTCCGATTCTCCTAGGTTCTTATCTG
CAGAGCAAATTTCCAAGAGCGGTGAAAATTGTTACGCCTTTTGCTCCCCTTCTAGCAGTC
TTAACTTCGTCACTTCTTGCTTGCAGTGTATTCTCAGAAAATGTTGTTCGTCTGAGATCT
TCAATGGTTGACACGTCAGTTTCTTCTGATTTATCTCTATTTCATCAGGCTCAAGCAATA
CTTGCGAGTGAATTTGGGGCTGTAGTAATCGCTGTACTTTTGCTTCATTCTGCTGGATTC
CTTGTAGGGTATCTGGCTGCAGCCTTGGGTGGTCTCAGGGAACCTGAGAGACGTGCTATA
TCCATTGAGGTTGGCATGCAGAATTCCTCCTTGGGAGTGGTTCTAGCGACCGCACATTTT
GCATCCCCATTGGTTGCATTACCTCCTGCAATGTCAGCTGTTATTATGAACATAATGGGC
AGTACTTTAGGTTTCTTTTGGAGATATATTGACCCTTCTGATTCAAAAACTAGTCTGGAA
GCCACTGATAAATCATAG

Peptide Sequence

PEP ID

XP_016476657.1
PEP Infomation

PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Nicotiana tabacum]
Sequence

MAFSLCFTPLTLYPKQIPLKKLIISTRPKMSRQRLLTVNCVQENSHNLPAAVVHVKSRWE
EWLSTAASLYPVYVTVGGIVACLRPSTFSWFVNAGPTSYSLALGFIMLSMGLTLELKDLF
NLFLQRPLSILFGCAAQYTIMPAFGVLVSKSMGLPPSISVGLILLACCPGGTASNVVTLI
AQGDVPLSVVMTLCTTLGAVVLTPLLTMILAGTYVPVDAIKLSISTLQVVVAPILLGSYL
QSKFPRAVKIVTPFAPLLAVLTSSLLACSVFSENVVRLRSSMVDTSVSSDLSLFHQAQAI
LASEFGAVVIAVLLLHSAGFLVGYLAAALGGLREPERRAISIEVGMQNSSLGVVLATAHF
ASPLVALPPAMSAVIMNIMGSTLGFFWRYIDPSDSKTSLEATDKS

Transcript Sequence

Gene sequence data has not been registered.